Class Hierarchy
Date: 2019-10-22

# Hierarchy For All Packages

Package Hierarchies:

- org.jmol.adapter.readers.cif,
- org.jmol.adapter.readers.molxyz,
- org.jmol.adapter.readers.more,
- org.jmol.adapter.readers.pdb,
- org.jmol.adapter.readers.pymol,
- org.jmol.adapter.readers.quantum,
- org.jmol.adapter.readers.simple,
- org.jmol.adapter.readers.spartan,
- org.jmol.adapter.readers.xml,
- org.jmol.adapter.readers.xtal,
- org.jmol.adapter.smarter,
- org.jmol.adapter.writers,
- org.jmol.api,
- org.jmol.api.js,
- org.jmol.applet,
- org.jmol.appletjs,
- org.jmol.atomdata,
- org.jmol.awt,
- org.jmol.awtjs,
- org.jmol.awtjs.swing,
- org.jmol.awtjs2d,
- org.jmol.bspt,
- org.jmol.c,
- org.jmol.console,
- org.jmol.consolejs,
- org.jmol.dialog,
- org.jmol.dssx,
- org.jmol.export,
- org.jmol.g3d,
- org.jmol.geodesic,
- org.jmol.i18n,
- org.jmol.image,
- org.jmol.io,
- org.jmol.jsv,
- org.jmol.jvxl.api,
- org.jmol.jvxl.calc,
- org.jmol.jvxl.data,
- org.jmol.jvxl.readers,
- org.jmol.minimize,
- org.jmol.minimize.forcefield,
- org.jmol.modelkit,
- org.jmol.modelset,
- org.jmol.modelsetbio,
- org.jmol.multitouch,
- org.jmol.multitouch.jni,
- org.jmol.multitouch.sparshui,
- org.jmol.navigate,
- org.jmol.popup,
- org.jmol.quantum,
- org.jmol.quantum.mo,
- org.jmol.render,
- org.jmol.renderbio,
- org.jmol.rendercgo,
- org.jmol.renderspecial,
- org.jmol.rendersurface,
- org.jmol.script,
- org.jmol.scriptext,
- org.jmol.shape,
- org.jmol.shapebio,
- org.jmol.shapecgo,
- org.jmol.shapespecial,
- org.jmol.shapesurface,
- org.jmol.smiles,
- org.jmol.symmetry,
- org.jmol.thread,
- org.jmol.translation,
- org.jmol.util,
- org.jmol.viewer,
- org.jmol.viewer.binding,
- org.openscience.jmol.app,
- org.openscience.jmol.app.jmolpanel,
- org.openscience.jmol.app.jmolpanel.console,
- org.openscience.jmol.app.jsonkiosk,
- org.openscience.jmol.app.surfacetool,
- org.openscience.jmol.app.webexport,
- org.openscience.jvxl,
- org.openscience.jvxl.simplewriter

## Class Hierarchy

- java.lang.Object
  - org.jmol.export.___Exporter
    - org.jmol.export.__CartesianExporter
      - org.jmol.export._IdtfExporter
      - org.jmol.export._MayaExporter
      - org.jmol.export._ObjExporter
      - org.jmol.export._VrmlExporter
        - org.jmol.export._StlExporter
        - org.jmol.export._X3dExporter
      - org.jmol.export.JSExporter
    - org.jmol.export.__RayTracerExporter
      - org.jmol.export._PovrayExporter
      - org.jmol.export._TachyonExporter
  - javax.swing.AbstractAction (implements javax.swing.Action, java.lang.Cloneable, java.io.Serializable)
    - org.openscience.jmol.app.jmolpanel.DisplayPanel.CheckBoxMenuItemAction
    - org.openscience.jmol.app.jmolpanel.DisplayPanel.DefineCenterAction
    - org.openscience.jmol.app.jmolpanel.DisplayPanel.HomeAction
    - org.openscience.jmol.app.jmolpanel.DisplayPanel.MoveToAction
    - org.openscience.jmol.app.jmolpanel.DisplayPanel.SetStatusAction
    - org.openscience.jmol.app.jmolpanel.JmolPanel.AboutAction
    - org.openscience.jmol.app.jmolpanel.JmolPanel.AtomSetChooserAction
    - org.openscience.jmol.app.jmolpanel.JmolPanel.CloseAction
    - org.openscience.jmol.app.jmolpanel.JmolPanel.ConsoleAction
    - org.openscience.jmol.app.jmolpanel.JmolPanel.CopyImageAction
    - org.openscience.jmol.app.jmolpanel.JmolPanel.CopyScriptAction
    - org.openscience.jmol.app.jmolpanel.JmolPanel.CreditsAction
    - org.openscience.jmol.app.jmolpanel.JmolPanel.ExecuteScriptAction
    - org.openscience.jmol.app.jmolpanel.JmolPanel.ExitAction
    - org.openscience.jmol.app.jmolpanel.JmolPanel.ExportAction
    - org.openscience.jmol.app.jmolpanel.JmolPanel.GaussianAction
    - org.openscience.jmol.app.jmolpanel.JmolPanel.NewAction
      - org.openscience.jmol.app.jmolpanel.JmolPanel.OpenAction
      - org.openscience.jmol.app.jmolpanel.JmolPanel.OpenMolAction
      - org.openscience.jmol.app.jmolpanel.JmolPanel.OpenPdbAction
      - org.openscience.jmol.app.jmolpanel.JmolPanel.OpenUrlAction
    - org.openscience.jmol.app.jmolpanel.JmolPanel.NewwinAction
    - org.openscience.jmol.app.jmolpanel.JmolPanel.PasteClipboardAction
    - org.openscience.jmol.app.jmolpanel.JmolPanel.PovrayAction
    - org.openscience.jmol.app.jmolpanel.JmolPanel.PrintAction
    - org.openscience.jmol.app.jmolpanel.JmolPanel.RecentFilesAction
    - org.openscience.jmol.app.jmolpanel.JmolPanel.ResizeAction
    - org.openscience.jmol.app.jmolpanel.JmolPanel.ScriptEditorAction
    - org.openscience.jmol.app.jmolpanel.JmolPanel.ScriptWindowAction
    - org.openscience.jmol.app.jmolpanel.JmolPanel.SurfaceToolAction
    - org.openscience.jmol.app.jmolpanel.JmolPanel.ToWebAction
    - org.openscience.jmol.app.jmolpanel.JmolPanel.UguideAction
    - org.openscience.jmol.app.jmolpanel.JmolPanel.ViewMeasurementTableAction
    - org.openscience.jmol.app.jmolpanel.JmolPanel.WhatsNewAction
    - org.openscience.jmol.app.jmolpanel.JmolPanel.WriteAction
    - org.openscience.jmol.app.jmolpanel.PreferencesDialog.PrefsAction
  - java.util.AbstractCollection<E> (implements java.util.Collection<E>)
    - java.util.AbstractList<E> (implements java.util.List<E>)
      - java.util.ArrayList<E> (implements java.lang.Cloneable, java.util.List<E>, java.util.RandomAccess, java.io.Serializable)
        - javajs.util.Lst<V>
          - org.jmol.smiles.SmilesRingSet
  - javax.swing.text.AbstractDocument (implements javax.swing.text.Document, java.io.Serializable)
    - javax.swing.text.DefaultStyledDocument (implements javax.swing.text.StyledDocument)
      - org.openscience.jmol.app.jmolpanel.console.AppConsole.ConsoleDocument
      - org.jmol.console.ScriptEditor.EditorDocument
  - javax.swing.table.AbstractTableModel (implements java.io.Serializable, javax.swing.table.TableModel)
    - org.openscience.jmol.app.jmolpanel.MeasurementTable.MeasurementTableModel
  - org.jmol.viewer.ActionManager (implements org.jmol.api.EventManager)
    - org.jmol.multitouch.ActionManagerMT (implements org.jmol.multitouch.JmolMultiTouchClient)
  - org.jmol.adapter.readers.quantum.AdfReader.SymmetryData
  - org.jmol.viewer.AnimationManager
  - org.jmol.dssx.AnnotationParser (implements org.jmol.api.JmolAnnotationParser)
    - org.jmol.dssx.DSSR1
  - org.openscience.jmol.app.webexport.ArrayListTransferHandler.ArrayListTransferable (implements java.awt.datatransfer.Transferable)
  - org.openscience.jvxl.simplewriter.ASimpleJvxlWriter
  - org.jmol.modelset.AtomCollection
    - org.jmol.modelset.BondCollection
      - org.jmol.modelset.ModelSet
  - org.jmol.modelset.AtomCollection.AtomSorter (implements java.util.Comparator<T>)
  - org.jmol.atomdata.AtomData
  - org.jmol.adapter.smarter.AtomIterator (implements org.jmol.api.JmolAdapterAtomIterator)
  - org.jmol.modelset.AtomIteratorWithinModel (implements org.jmol.api.AtomIndexIterator)
    - org.jmol.modelset.AtomIteratorWithinModelSet
  - org.jmol.adapter.smarter.AtomSetCollection
  - org.jmol.adapter.smarter.AtomSetCollectionReader (implements javajs.api.GenericLineReader)
    - org.jmol.adapter.readers.xtal.AbinitReader
    - org.jmol.adapter.readers.xtal.AimsReader
    - org.jmol.adapter.readers.simple.AlchemyReader
    - org.jmol.adapter.readers.simple.AmpacReader
    - org.jmol.adapter.readers.quantum.BasisFunctionReader
      - org.jmol.adapter.readers.quantum.MOReader
        - org.jmol.adapter.readers.quantum.GamessReader
          - org.jmol.adapter.readers.quantum.GamessUKReader
          - org.jmol.adapter.readers.quantum.GamessUSReader
        - org.jmol.adapter.readers.quantum.GaussianReader
          - org.jmol.adapter.readers.quantum.GaussianFchkReader
        - org.jmol.adapter.readers.quantum.GenNBOReader
        - org.jmol.adapter.readers.quantum.JaguarReader
        - org.jmol.adapter.readers.quantum.NWChemReader
        - org.jmol.adapter.readers.quantum.PsiReader
        - org.jmol.adapter.readers.quantum.QchemReader
      - org.jmol.adapter.readers.quantum.SlaterReader
        - org.jmol.adapter.readers.quantum.AdfReader
        - org.jmol.adapter.readers.quantum.DgridReader
        - org.jmol.adapter.readers.quantum.MopacSlaterReader
          - org.jmol.adapter.readers.quantum.CsfReader
          - org.jmol.adapter.readers.quantum.MoldenReader
            - org.jmol.adapter.readers.quantum.QCJSONReader
          - org.jmol.adapter.readers.quantum.MopacGraphfReader
          - org.jmol.adapter.readers.quantum.WebMOReader
      - org.jmol.adapter.readers.spartan.SpartanInputReader
        - org.jmol.adapter.readers.spartan.OdysseyReader
        - org.jmol.adapter.readers.spartan.SpartanSmolReader
      - org.jmol.adapter.readers.spartan.SpartanReader
    - org.jmol.adapter.readers.xtal.BilbaoReader
    - org.jmol.adapter.readers.more.BinaryDcdReader
    - org.jmol.adapter.readers.xtal.CastepReader
    - org.jmol.adapter.readers.xtal.CgdReader
    - org.jmol.adapter.readers.cif.CifReader
      - org.jmol.adapter.readers.cif.Cif2Reader
      - org.jmol.adapter.readers.cif.MMCifReader
        - org.jmol.adapter.readers.cif.MMTFReader
    - org.jmol.adapter.readers.xtal.CrystalReader
    - org.jmol.adapter.readers.simple.CubeReader
    - org.jmol.adapter.readers.xtal.DmolReader
    - org.jmol.adapter.readers.xtal.EspressoReader
    - org.jmol.adapter.readers.simple.FoldingXyzReader
      - org.jmol.adapter.readers.simple.TinkerReader
    - org.jmol.adapter.readers.more.ForceFieldReader
      - org.jmol.adapter.readers.more.MdTopReader
      - org.jmol.adapter.readers.more.Mol2Reader
    - org.jmol.adapter.readers.quantum.GaussianWfnReader
    - org.jmol.adapter.readers.simple.GhemicalMMReader
    - org.jmol.adapter.readers.more.GromacsReader
    - org.jmol.adapter.readers.xtal.GulpReader
    - org.jmol.adapter.readers.simple.HyperChemReader
    - org.jmol.adapter.readers.simple.InputReader
      - org.jmol.adapter.readers.simple.MopacArchiveReader
    - org.jmol.adapter.readers.xtal.JanaReader
    - org.jmol.adapter.readers.simple.JmeReader
    - org.jmol.adapter.readers.simple.JSONReader
    - org.jmol.adapter.readers.xtal.MagresReader
    - org.jmol.adapter.readers.more.MdCrdReader
    - org.jmol.adapter.readers.molxyz.MolReader
      - org.jmol.adapter.readers.more.JcampdxReader (implements org.jmol.api.JmolJDXMOLReader)
      - org.jmol.adapter.readers.molxyz.Mol3DReader
    - org.jmol.adapter.readers.simple.MopacReader
    - org.jmol.adapter.readers.pdb.PdbReader
      - org.jmol.adapter.readers.pdb.JmolDataReader
      - org.jmol.adapter.readers.pdb.P2nReader
      - org.jmol.adapter.readers.pdb.PqrReader
      - org.jmol.adapter.readers.pymol.PyMOLReader (implements org.jmol.api.PymolAtomReader)
    - org.jmol.adapter.readers.xtal.ShelxReader
    - org.jmol.adapter.readers.xtal.SiestaReader
    - org.jmol.adapter.readers.more.TlsDataOnlyReader
    - org.jmol.adapter.readers.xtal.VaspOutcarReader
    - org.jmol.adapter.readers.xtal.VaspPoscarReader
      - org.jmol.adapter.readers.more.AFLOWReader
      - org.jmol.adapter.readers.xtal.VaspChgcarReader
    - org.jmol.adapter.readers.xtal.Wien2kReader
    - org.jmol.adapter.readers.xtal.XcrysdenReader
    - org.jmol.adapter.readers.xml.XmlReader
      - org.jmol.adapter.readers.xml.XmlArgusReader
      - org.jmol.adapter.readers.xml.XmlChem3dReader
      - org.jmol.adapter.readers.xml.XmlCmlReader
        - org.jmol.adapter.readers.xml.XmlMOReader
          - org.jmol.adapter.readers.xml.XmlMolproReader
      - org.jmol.adapter.readers.xml.XmlMagResReader
      - org.jmol.adapter.readers.xml.XmlOdysseyReader
      - org.jmol.adapter.readers.xml.XmlQEReader
      - org.jmol.adapter.readers.xml.XmlVaspReader
      - org.jmol.adapter.readers.xml.XmlXsdReader
    - org.jmol.adapter.readers.molxyz.XyzReader
  - org.jmol.adapter.smarter.AtomSetObject
    - org.jmol.adapter.smarter.Bond
  - org.jmol.minimize.forcefield.AtomType
  - org.jmol.image.AviCreator (implements org.jmol.api.JmolMovieCreatorInterface)
  - org.jmol.awt.AwtClipboard (implements java.awt.datatransfer.Transferable)
  - org.jmol.awt.AwtFont
  - org.jmol.awt.AwtG2D (implements org.jmol.api.GenericGraphics)
  - org.jmol.awt.AwtPopupHelper (implements java.awt.event.ActionListener, java.awt.event.ItemListener, java.awt.event.MouseListener, org.jmol.popup.PopupHelper)
  - org.jmol.awt.AwtSwingComponent (implements org.jmol.api.SC)
  - org.jmol.modelsetbio.BasePair
  - org.jmol.adapter.readers.quantum.BasisFunctionReader.MOEnergySorter (implements java.util.Comparator<T>)
  - org.jmol.viewer.binding.Binding
    - org.jmol.viewer.binding.JmolBinding
      - org.jmol.viewer.binding.DragBinding
      - org.jmol.viewer.binding.PfaatBinding
      - org.jmol.viewer.binding.RasmolBinding
  - org.jmol.modelsetbio.BioExt
  - org.jmol.modelsetbio.BioModelSet
  - org.jmol.modelsetbio.BioPolymer (implements org.jmol.modelset.Structure)
    - org.jmol.modelsetbio.AlphaPolymer
      - org.jmol.modelsetbio.AminoPolymer
    - org.jmol.modelsetbio.CarbohydratePolymer
    - org.jmol.modelsetbio.PhosphorusPolymer
      - org.jmol.modelsetbio.NucleicPolymer
  - org.jmol.modelsetbio.BioResolver (implements java.util.Comparator<T>)
  - org.jmol.modelset.BondIteratorSelected (implements org.jmol.modelset.BondIterator)
  - org.jmol.util.BoxInfo
  - org.jmol.dssx.Bridge
  - javajs.util.BS (implements java.lang.Cloneable, javajs.api.JSONEncodable)
    - org.jmol.modelset.BondSet
    - org.jmol.smiles.SmilesRing
  - org.jmol.bspt.Bspf
  - org.jmol.bspt.Bspt
  - org.jmol.util.BSUtil
  - org.jmol.awtjs.swing.ButtonGroup
  - org.jmol.util.BZone
  - org.jmol.util.C
  - org.jmol.minimize.forcefield.Calculation
    - org.jmol.minimize.forcefield.MMFFAngleCalc
    - org.jmol.minimize.forcefield.MMFFDistanceCalc
    - org.jmol.minimize.forcefield.MMFFESCalc
    - org.jmol.minimize.forcefield.MMFFOOPCalc
    - org.jmol.minimize.forcefield.MMFFSBCalc
    - org.jmol.minimize.forcefield.MMFFTorsionCalc
    - org.jmol.minimize.forcefield.MMFFVDWCalc
    - org.jmol.minimize.forcefield.UFFAngleCalc
    - org.jmol.minimize.forcefield.UFFDistanceCalc
    - org.jmol.minimize.forcefield.UFFOOPCalc
    - org.jmol.minimize.forcefield.UFFTorsionCalc
    - org.jmol.minimize.forcefield.UFFVDWCalc
  - org.jmol.minimize.forcefield.Calculations
    - org.jmol.minimize.forcefield.CalculationsMMFF
    - org.jmol.minimize.forcefield.CalculationsUFF
  - org.jmol.awtjs.swing.Cell
  - org.jmol.modelset.Chain (implements org.jmol.modelset.Structure)
  - org.jmol.viewer.ChimeMessenger (implements org.jmol.viewer.JmolChimeMessenger)
  - javajs.util.CifDataParser (implements javajs.api.GenericCifDataParser)
    - org.jmol.adapter.readers.cif.Cif2DataParser
  - org.jmol.symmetry.CIPChirality
  - org.jmol.symmetry.CIPChirality.CIPAtom (implements java.lang.Cloneable, java.lang.Comparable<T>)
  - org.jmol.symmetry.CIPData
    - org.jmol.symmetry.CIPDataSmiles
    - org.jmol.symmetry.CIPDataTracker
  - org.jmol.symmetry.CIPDataTracker.CIPTracker
  - org.jmol.g3d.CircleRenderer (implements org.jmol.g3d.G3DRenderer)
  - java.awt.Color (implements java.awt.Paint, java.io.Serializable)
    - org.jmol.awt.AwtColor (implements javajs.api.GenericColor)
  - org.jmol.awtjs.swing.Color (implements javajs.api.GenericColor)
  - org.jmol.util.ColorEncoder
  - org.jmol.viewer.ColorManager
  - org.jmol.util.CommandHistory
  - java.awt.Component (implements java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable)
    - java.awt.Container
      - javax.swing.JComponent (implements java.io.Serializable)
        - javax.swing.AbstractButton (implements java.awt.ItemSelectable, javax.swing.SwingConstants)
          - javax.swing.JButton (implements javax.accessibility.Accessible)
            - org.jmol.console.JmolButton (implements org.jmol.api.JmolAbstractButton)
              - org.openscience.jmol.app.jmolpanel.JmolPanel.AnimButton (implements java.awt.event.MouseListener)
          - javax.swing.JMenuItem (implements javax.accessibility.Accessible, javax.swing.MenuElement)
            - javax.swing.JCheckBoxMenuItem (implements javax.accessibility.Accessible, javax.swing.SwingConstants)
              - org.jmol.console.KeyJCheckBoxMenuItem (implements org.jmol.api.JmolAbstractButton)
            - javax.swing.JMenu (implements javax.accessibility.Accessible, javax.swing.MenuElement)
              - org.jmol.console.KeyJMenu (implements org.jmol.api.JmolAbstractButton)
            - javax.swing.JRadioButtonMenuItem (implements javax.accessibility.Accessible)
              - org.jmol.console.KeyJRadioButtonMenuItem (implements org.jmol.api.JmolAbstractButton)
            - org.jmol.console.KeyJMenuItem (implements org.jmol.api.JmolAbstractButton)
          - javax.swing.JToggleButton (implements javax.accessibility.Accessible)
            - javax.swing.JCheckBox (implements javax.accessibility.Accessible)
              - org.jmol.console.KeyJCheckBox (implements org.jmol.api.JmolAbstractButton)
            - org.jmol.console.JmolToggleButton (implements org.jmol.api.JmolAbstractButton)
        - javax.swing.JFileChooser (implements javax.accessibility.Accessible)
          - org.jmol.dialog.FileChooser
        - javax.swing.JLabel (implements javax.accessibility.Accessible, javax.swing.SwingConstants)
          - org.jmol.console.JmolLabel (implements org.jmol.api.JmolAbstractButton)
          - org.openscience.jmol.app.surfacetool.SurfaceToolGUI.SurfaceListCellRenderer (implements javax.swing.ListCellRenderer<E>)
          - org.openscience.jmol.app.webexport.WebPanel.InstanceCellRenderer (implements javax.swing.ListCellRenderer<E>)
        - javax.swing.JPanel (implements javax.accessibility.Accessible)
          - org.jmol.dialog.Dialog (implements org.jmol.api.JmolDialogInterface)
          - org.openscience.jmol.app.jmolpanel.DisplayPanel (implements java.awt.event.ComponentListener, org.jmol.awt.JmolFrame, java.awt.print.Printable)
          - org.jmol.dialog.FilePreview (implements java.beans.PropertyChangeListener)
          - org.jmol.dialog.FilePreview.FPPanel
          - org.jmol.console.ImageDialog.ImageCanvas
          - org.openscience.jmol.app.jmolpanel.JmolPanel (implements org.openscience.jmol.app.jsonkiosk.JsonNioClient, org.openscience.jmol.app.SplashInterface)
            - org.openscience.jmol.app.Jmol
          - org.openscience.jmol.app.webexport.Molecules
          - org.openscience.jmol.app.webexport.Orbitals
          - org.openscience.jmol.app.jmolpanel.StatusBar
          - org.openscience.jmol.app.surfacetool.SurfaceToolGUI (implements java.awt.event.ActionListener, javax.swing.event.ChangeListener, javax.swing.event.ListSelectionListener, javax.swing.WindowConstants, java.awt.event.WindowFocusListener, java.awt.event.WindowListener)
          - org.openscience.jmol.app.webexport.Test (implements java.awt.event.ActionListener)
          - org.openscience.jmol.app.webexport.WebExport (implements java.awt.event.WindowListener)
          - org.openscience.jmol.app.webexport.WebPanel (implements java.awt.event.ActionListener, java.awt.event.ItemListener, javax.swing.event.ListSelectionListener)
            - org.openscience.jmol.app.webexport.PopInJmol (implements javax.swing.event.ChangeListener)
            - org.openscience.jmol.app.webexport.ScriptButtons
        - javax.swing.text.JTextComponent (implements javax.accessibility.Accessible, javax.swing.Scrollable)
          - javax.swing.JEditorPane
            - javax.swing.JTextPane
              - org.openscience.jmol.app.jmolpanel.console.AppConsole.ConsoleTextPane
              - org.jmol.console.AppletConsole.GenericTextPane (implements org.jmol.console.GenericTextArea)
              - org.jmol.console.ScriptEditor.EditorTextPane
          - javax.swing.JTextArea
            - org.jmol.console.AppletConsole.ControlEnterTextArea (implements org.jmol.console.GenericTextArea)
            - org.openscience.jmol.app.jmolpanel.console.ConsoleTextArea
      - java.awt.Panel (implements javax.accessibility.Accessible)
        - java.applet.Applet
          - javax.swing.JApplet (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer)
            - org.jmol.applet.AppletWrapper
              - org.jmol.applet.JmolApplet (implements org.jmol.api.JmolAppletInterface)
      - java.awt.Window (implements javax.accessibility.Accessible)
        - java.awt.Dialog
          - javax.swing.JDialog (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
            - org.openscience.jmol.app.jmolpanel.AboutDialog (implements javax.swing.event.HyperlinkListener)
            - org.openscience.jmol.app.jmolpanel.GaussianDialog (implements java.awt.event.ActionListener, javax.swing.event.ChangeListener, java.awt.event.MouseListener)
            - org.openscience.jmol.app.jmolpanel.HelpDialog (implements javax.swing.event.HyperlinkListener)
              - org.openscience.jmol.app.jmolpanel.CreditsDialog
              - org.openscience.jmol.app.jmolpanel.WhatsNewDialog
            - org.jmol.console.ImageDialog (implements java.awt.event.ActionListener, org.jmol.api.GenericImageDialog, java.awt.event.WindowListener)
            - org.openscience.jmol.app.jmolpanel.MeasurementTable
            - org.openscience.jmol.app.jmolpanel.PovrayDialog
            - org.openscience.jmol.app.jmolpanel.PreferencesDialog (implements java.awt.event.ActionListener)
            - org.openscience.jmol.app.jmolpanel.RecentFilesDialog (implements java.awt.event.ActionListener, java.awt.event.WindowListener)
            - org.jmol.console.ScriptEditor (implements java.awt.event.ActionListener, org.jmol.api.JmolScriptEditorInterface, java.awt.event.WindowListener)
        - java.awt.Frame (implements java.awt.MenuContainer)
          - javax.swing.JFrame (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
            - org.openscience.jmol.app.jmolpanel.AtomSetChooser (implements java.awt.event.ActionListener, javax.swing.event.ChangeListener, java.beans.PropertyChangeListener, java.lang.Runnable, javax.swing.event.TreeSelectionListener)
            - org.openscience.jmol.app.jsonkiosk.BannerFrame
            - org.openscience.jmol.app.jsonkiosk.KioskFrame
        - org.openscience.jmol.app.jmolpanel.Splash (implements org.openscience.jmol.app.SplashInterface)
  - org.jmol.awtjs.swing.Component
    - org.jmol.awtjs.swing.Container
      - org.jmol.awtjs.swing.JComponent
        - org.jmol.awtjs.swing.AbstractButton (implements org.jmol.api.SC)
          - org.jmol.awtjs.swing.JButton
          - org.jmol.awtjs.swing.JCheckBox
          - org.jmol.awtjs.swing.JComboBox<T>
          - org.jmol.awtjs.swing.JMenuItem
            - org.jmol.awtjs.swing.JCheckBoxMenuItem
            - org.jmol.awtjs.swing.JMenu
            - org.jmol.awtjs.swing.JRadioButtonMenuItem
          - org.jmol.awtjs.swing.JPopupMenu
        - org.jmol.awtjs.swing.JComponentImp
        - org.jmol.awtjs.swing.JContentPane
        - org.jmol.awtjs.swing.JEditorPane
        - org.jmol.awtjs.swing.JLabel
        - org.jmol.awtjs.swing.JPanel
        - org.jmol.awtjs.swing.JScrollPane
        - org.jmol.awtjs.swing.JSplitPane
        - org.jmol.awtjs.swing.JTable (implements org.jmol.awtjs.swing.ColumnSelectionModel, org.jmol.awtjs.swing.ListSelectionModel)
        - org.jmol.awtjs.swing.JTextField
        - org.jmol.awtjs.swing.JTextPane (implements org.jmol.awtjs.swing.Document)
      - org.jmol.awtjs.swing.JDialog
  - org.jmol.viewer.Connection
  - org.jmol.viewer.Connections
  - org.jmol.modelkit.Constraint
  - org.jmol.util.ContactPair
  - org.jmol.bspt.CubeIterator
  - org.jmol.g3d.CylinderRenderer
  - org.jmol.quantum.mo.DataAdder11H (implements org.jmol.quantum.mo.DataAdder)
  - org.jmol.quantum.mo.DataAdder13I (implements org.jmol.quantum.mo.DataAdder)
  - org.jmol.quantum.mo.DataAdder7F (implements org.jmol.quantum.mo.DataAdder)
  - org.jmol.quantum.mo.DataAdder9G (implements org.jmol.quantum.mo.DataAdder)
  - org.jmol.quantum.mo.DataAdderF (implements org.jmol.quantum.mo.DataAdder)
  - org.jmol.quantum.mo.DataAdderG (implements org.jmol.quantum.mo.DataAdder)
  - org.jmol.quantum.mo.DataAdderH (implements org.jmol.quantum.mo.DataAdder)
  - org.jmol.quantum.mo.DataAdderI (implements org.jmol.quantum.mo.DataAdder)
  - org.jmol.viewer.DataManager (implements org.jmol.api.JmolDataManager)
  - org.xml.sax.helpers.DefaultHandler (implements org.xml.sax.ContentHandler, org.xml.sax.DTDHandler, org.xml.sax.EntityResolver, org.xml.sax.ErrorHandler)
    - org.jmol.adapter.readers.xml.XmlHandler
  - org.jmol.util.DefaultLogger (implements org.jmol.util.LoggerInterface)
  - javax.swing.tree.DefaultMutableTreeNode (implements java.lang.Cloneable, javax.swing.tree.MutableTreeNode, java.io.Serializable)
    - org.openscience.jmol.app.jmolpanel.AtomSetChooser.AtomSet
  - org.jmol.dialog.Dialog.ExportChoiceListener (implements java.awt.event.ItemListener)
  - org.jmol.dialog.Dialog.QualityListener (implements javax.swing.event.ChangeListener)
  - java.util.Dictionary<K,V>
    - java.util.Hashtable<K,V> (implements java.lang.Cloneable, java.util.Map<K,V>, java.io.Serializable)
      - org.openscience.jmol.app.jsonkiosk.JsonNioService.JSONObject
      - org.jmol.export.UseTable
  - org.jmol.awtjs.swing.Dimension
  - org.jmol.shapespecial.Dipole
  - org.jmol.awt.Display
  - org.jmol.awtjs2d.Display
  - org.jmol.io.DOMReader
  - org.jmol.dssx.DSSP
  - org.jmol.dssx.DSSR0
  - org.jmol.util.Edge (implements org.jmol.util.SimpleEdge)
    - org.jmol.modelset.Bond
      - org.jmol.modelset.HBond
    - org.jmol.smiles.SmilesBond
  - org.jmol.util.EigenSort (implements java.util.Comparator<T>)
  - org.jmol.bspt.Element
    - org.jmol.bspt.Leaf
    - org.jmol.bspt.Node
  - org.jmol.util.Elements
  - org.jmol.shapespecial.Ellipsoid
  - org.jmol.geodesic.EnvelopeCalculation (implements org.jmol.api.JmolEnvCalc)
  - org.jmol.util.Escape
  - org.jmol.awtjs.Event
  - org.jmol.export.Export3D (implements org.jmol.api.JmolRendererInterface)
  - org.jmol.minimize.forcefield.FFParam
  - java.io.File (implements java.lang.Comparable<T>, java.io.Serializable)
    - org.jmol.awt.AwtFile (implements org.jmol.api.GenericFileInterface)
  - org.jmol.awt.FileDropper (implements java.awt.dnd.DropTargetListener)
  - javax.swing.filechooser.FileFilter
    - org.jmol.dialog.Dialog.TypeFilter
  - org.jmol.viewer.FileManager (implements javajs.api.BytePoster)
  - org.jmol.io.FileReader
  - org.openscience.jvxl.FileReader
  - org.jmol.io.FilesReader (implements org.jmol.api.JmolFilesReaderInterface)
  - org.openscience.jmol.app.jmolpanel.FileTyper
  - org.jmol.util.Font
  - org.jmol.minimize.forcefield.ForceField
    - org.jmol.minimize.forcefield.ForceFieldMMFF
    - org.jmol.minimize.forcefield.ForceFieldUFF
  - org.jmol.util.GData (implements org.jmol.api.JmolGraphicsInterface)
    - org.jmol.g3d.Graphics3D (implements org.jmol.api.JmolRendererInterface)
  - org.jmol.util.GenericApplet (implements org.jmol.api.JmolAppletInterface, org.jmol.api.JmolStatusListener)
    - org.jmol.applet.Jmol (implements org.jmol.applet.WrappedApplet)
    - org.jmol.appletjs.Jmol (implements javajs.api.JSInterface)
  - org.jmol.console.GenericConsole (implements org.jmol.api.JmolAppConsoleInterface, org.jmol.api.JmolCallbackListener)
    - org.jmol.consolejs.AppletConsole
    - org.jmol.console.JmolConsole (implements java.awt.event.ActionListener, java.awt.event.WindowListener)
      - org.openscience.jmol.app.jmolpanel.console.AppConsole (implements org.openscience.jmol.app.jmolpanel.console.EnterListener, org.jmol.api.JmolDropEditor)
      - org.jmol.console.AppletConsole
  - org.jmol.popup.GenericPopup (implements org.jmol.api.GenericMenuInterface)
    - org.jmol.popup.JmolGenericPopup
      - org.jmol.popup.JmolPopup
        - org.jmol.awt.AwtJmolPopup
        - org.jmol.awtjs2d.JSJmolPopup
      - org.jmol.modelkit.ModelKitPopup
        - org.jmol.awt.AwtModelKitPopup
        - org.jmol.awtjs2d.JSModelKitPopup
  - org.jmol.util.Geodesic
  - org.jmol.viewer.Gesture
  - org.jmol.viewer.GlobalSettings
  - org.jmol.awtjs.swing.Grid
  - org.jmol.awtjs.swing.GridBagConstraints
  - org.jmol.modelset.Group (implements org.jmol.modelset.Structure)
    - org.jmol.modelsetbio.Monomer
      - org.jmol.modelsetbio.AlphaMonomer
        - org.jmol.modelsetbio.AminoMonomer
      - org.jmol.modelsetbio.CarbohydrateMonomer
      - org.jmol.modelsetbio.PhosphorusMonomer
        - org.jmol.modelsetbio.NucleicMonomer
  - org.jmol.i18n.GT (implements org.jmol.api.Translator)
  - org.openscience.jmol.app.jmolpanel.GuiMap
  - org.jmol.symmetry.HallInfo
  - org.jmol.symmetry.HallRotation
  - org.jmol.symmetry.HallRotationTerm
  - org.jmol.symmetry.HallTranslation
  - org.openscience.jmol.app.jmolpanel.HelpDialog.PageLoader (implements java.lang.Runnable)
  - org.jmol.g3d.HermiteRenderer (implements org.jmol.g3d.G3DRenderer)
  - org.openscience.jmol.app.HistoryFile
  - org.jmol.awt.Image
  - org.jmol.awtjs2d.Image
  - java.io.InputStream (implements java.io.Closeable)
    - java.io.FilterInputStream
      - org.openscience.jvxl.MonitorInputStream
  - org.jmol.awtjs.swing.Insets
  - org.jmol.util.Int2IntHash
  - org.jmol.util.Int2IntHashEntry
  - org.jmol.api.Interface
  - org.jmol.jvxl.readers.IsoSolventReader.Face
  - org.jmol.viewer.JC
  - org.jmol.jsv.JDXMOLParser (implements org.jmol.api.JmolJDXMOLParser)
  - org.jmol.api.JmolAdapter
    - org.jmol.adapter.smarter.SmarterJmolAdapter
  - org.jmol.api.JmolAdapterBondIterator
    - org.jmol.adapter.smarter.BondIterator
  - org.jmol.api.JmolAdapterStructureIterator
    - org.jmol.adapter.smarter.StructureIterator
  - org.openscience.jmol.app.JmolApp (implements org.jmol.api.JmolAppAPI)
  - org.openscience.jmol.app.JmolApp.OptSort (implements java.util.Comparator<T>)
  - org.jmol.util.JmolAudio (implements org.jmol.api.JmolAudioPlayer, javax.sound.sampled.LineListener)
  - org.jmol.console.JmolConsole.FileChecker (implements java.io.FilenameFilter)
  - org.openscience.jmol.app.JmolData
  - org.openscience.jmol.app.webexport.JmolInstance
  - org.jmol.util.JmolMolecule
    - org.jmol.smiles.SmilesSearch
  - org.jmol.multitouch.JmolMultiTouchClientAdapter (implements org.jmol.multitouch.JmolMultiTouchAdapter)
    - org.jmol.multitouch.jni.JmolJniClientAdapter
    - org.jmol.multitouch.sparshui.JmolSparshClientAdapter (implements com.sparshui.client.SparshClient)
  - org.jmol.adapter.readers.pymol.JmolObject
  - org.openscience.jmol.app.jmolpanel.JmolPanel.ActionChangedListener (implements java.beans.PropertyChangeListener)
  - org.openscience.jmol.app.jmolpanel.JmolResourceHandler
  - org.jmol.viewer.JmolStateCreator
    - org.jmol.viewer.StateCreator
  - org.jmol.io.JmolUtil
  - org.jmol.api.JmolViewer
    - org.jmol.viewer.Viewer (implements org.jmol.atomdata.AtomDataServer, org.jmol.api.PlatformViewer)
  - org.jmol.awtjs2d.JSFile (implements org.jmol.api.GenericFileInterface)
  - org.jmol.awtjs2d.JSFont
  - org.jmol.awtjs2d.JsG2D (implements org.jmol.api.GenericGraphics)
  - org.openscience.jmol.app.jsonkiosk.JsonNioService.JsonNioServerThread (implements java.lang.Runnable)
  - org.openscience.jmol.app.jsonkiosk.JsonNioService.JsonNioThread (implements java.lang.Runnable)
  - org.jmol.util.JSONWriter
    - org.jmol.adapter.writers.QCJSONWriter
  - org.jmol.jsv.JSpecView (implements org.jmol.api.JmolJSpecView)
  - org.jmol.awtjs2d.JSPopupHelper (implements org.jmol.popup.PopupHelper)
  - org.openscience.jvxl.Jvxl
  - org.jmol.jvxl.data.JvxlCoder
  - org.jmol.jvxl.data.JvxlData
  - org.openscience.jvxl.simplewriter.JvxlWrite
  - org.jmol.modelset.LabelToken
  - org.jmol.i18n.Language
  - org.jmol.awtjs.swing.LayoutManager
    - org.jmol.awtjs.swing.BorderLayout
    - org.jmol.awtjs.swing.FlowLayout
    - org.jmol.awtjs.swing.GridBagLayout
  - org.jmol.util.Logger
  - org.openscience.jmol.app.webexport.LogPanel
  - org.openscience.jmol.app.jmolpanel.LoopedStreams
  - javajs.util.M34
    - javajs.util.M4
      - org.jmol.symmetry.SymmetryOperation
  - org.jmol.jvxl.calc.MarchingSquares
  - org.jmol.jvxl.calc.MarchingSquares.Triangle
  - org.jmol.scriptext.MathExt
  - org.jmol.modelset.Measurement
    - org.jmol.modelset.MeasurementPending
  - org.jmol.modelset.MeasurementData (implements org.jmol.api.JmolMeasurementClient)
  - org.jmol.util.MeshCapper
  - org.jmol.util.MeshCapper.MeshCapperSorter (implements java.util.Comparator<T>)
  - org.jmol.export.MeshData
  - org.jmol.jvxl.data.MeshData.SortSet (implements java.util.Comparator<T>)
  - org.jmol.jvxl.data.MeshData.SSet
  - org.jmol.util.MeshSlicer
  - org.jmol.util.MeshSurface
    - org.jmol.shape.Mesh
      - org.jmol.shapespecial.DrawMesh
        - org.jmol.shapecgo.CGOMesh
      - org.jmol.shapesurface.IsosurfaceMesh
    - org.jmol.jvxl.data.MeshData
  - org.jmol.minimize.MinAtom
  - org.jmol.minimize.Minimizer
  - org.jmol.minimize.MinObject
    - org.jmol.minimize.MinAngle
    - org.jmol.minimize.MinBond
    - org.jmol.minimize.MinPosition
    - org.jmol.minimize.MinTorsion
  - org.jmol.adapter.readers.cif.MMCifValidationParser
  - org.jmol.minimize.MMConstraint
  - org.jmol.modelset.Model
    - org.jmol.modelsetbio.BioModel
  - org.jmol.modelset.ModelLoader
  - org.jmol.viewer.ModelManager
  - org.jmol.util.Modulation
  - org.jmol.util.MolWriter
  - org.jmol.viewer.MotionPoint
  - org.jmol.awt.Mouse (implements org.jmol.api.GenericMouseInterface, java.awt.event.KeyListener, java.awt.event.MouseListener, java.awt.event.MouseMotionListener, java.awt.event.MouseWheelListener)
  - org.jmol.awtjs2d.Mouse (implements org.jmol.api.GenericMouseInterface)
  - org.jmol.viewer.MouseState
  - org.jmol.thread.MoveToThread.Slider
  - org.jmol.adapter.readers.cif.MSRdr (implements org.jmol.adapter.smarter.MSInterface)
    - org.jmol.adapter.readers.cif.MSCifParser
  - org.jmol.adapter.readers.quantum.NBOParser
  - naga.NIOService
    - org.openscience.jmol.app.jsonkiosk.JsonNioService (implements org.openscience.jmol.app.jsonkiosk.JsonNioServer)
  - org.jmol.quantum.NMRCalculation (implements org.jmol.api.JmolNMRInterface)
  - org.jmol.util.Normix
  - org.jmol.renderbio.NucleicRenderer
  - org.jmol.modelset.Orientation
  - org.jmol.viewer.OutputManager
    - org.jmol.viewer.OutputManagerAwt
    - org.jmol.viewer.OutputManagerJS
  - org.jmol.jvxl.readers.Parameters
  - org.jmol.util.Parser
  - org.jmol.util.PatternMatcher (implements org.jmol.api.JmolPatternMatcher)
  - org.jmol.adapter.readers.pymol.PickleReader
  - org.jmol.g3d.Pixelator
    - org.jmol.g3d.PixelatorScreened
    - org.jmol.g3d.PixelatorShaded
    - org.jmol.g3d.PixelatorT
  - org.jmol.awt.Platform (implements org.jmol.api.GenericPlatform)
  - org.jmol.awtjs2d.Platform (implements org.jmol.api.GenericPlatform)
    - org.jmol.awtjs.Platform
  - org.jmol.g3d.Platform3D
  - org.jmol.shapesurface.PMeshWriter
  - org.jmol.translation.PO
  - org.jmol.symmetry.PointGroup
  - org.jmol.symmetry.PointGroup.Operation
  - org.jmol.bspt.PointIterator
  - org.jmol.shapespecial.Polyhedron
  - org.jmol.smiles.PolyhedronStereoSorter (implements java.util.Comparator<T>)
  - org.jmol.popup.PopupResource
    - org.jmol.popup.MainPopupResourceBundle
    - org.jmol.modelkit.ModelKitPopupResourceBundle
  - org.jmol.g3d.PrecisionRenderer
    - org.jmol.g3d.LineRenderer
    - org.jmol.g3d.TriangleRenderer (implements org.jmol.g3d.G3DRenderer)
  - org.jmol.viewer.PropertyManager (implements org.jmol.api.JmolPropertyManager)
  - org.jmol.modelsetbio.ProteinStructure (implements org.jmol.modelset.Structure)
    - org.jmol.modelsetbio.Annotation
    - org.jmol.modelsetbio.Helix
    - org.jmol.modelsetbio.Sheet
    - org.jmol.modelsetbio.Turn
  - org.jmol.adapter.readers.pymol.PyMOL
  - org.jmol.adapter.readers.pymol.PyMOLGroup
  - org.jmol.adapter.readers.pymol.PyMOLScene (implements org.jmol.api.JmolSceneGenerator)
  - org.jmol.adapter.readers.quantum.QchemReader.MOInfo
  - org.jmol.quantum.QS
  - org.jmol.quantum.QuantumCalculation
    - org.jmol.quantum.MepCalculation
      - org.jmol.quantum.MlpCalculation
    - org.jmol.quantum.MOCalculation
    - org.jmol.quantum.QuantumPlaneCalculation
      - org.jmol.quantum.NciCalculation
  - org.jmol.atomdata.RadiusData
  - org.jmol.util.Rectangle
  - org.jmol.render.RepaintManager (implements org.jmol.api.JmolRepaintManager)
  - org.jmol.adapter.smarter.Resolver
  - org.jmol.i18n.Resource
  - org.jmol.util.Rgb16
  - org.jmol.renderbio.RocketRenderer
  - javajs.util.SB
    - org.jmol.adapter.writers.QCJSONWriter.SparseArray
  - org.jmol.viewer.Scene
  - org.jmol.script.ScriptContext
  - org.jmol.console.ScriptEditor.EditorDocument.MyUndoableEditListener (implements javax.swing.event.UndoableEditListener)
  - org.jmol.script.ScriptError (implements org.jmol.api.JmolScriptEvaluator)
    - org.jmol.script.ScriptParam
      - org.jmol.script.ScriptExpr
        - org.jmol.script.ScriptEval
  - org.jmol.scriptext.ScriptExt
    - org.jmol.scriptext.CmdExt
    - org.jmol.scriptext.IsoExt
  - org.jmol.script.ScriptFlowContext
  - org.jmol.script.ScriptFunction (implements org.jmol.api.JmolScriptFunction)
    - org.jmol.script.ScriptParallelProcessor (implements org.jmol.api.JmolParallelProcessor)
  - org.jmol.script.ScriptManager (implements org.jmol.api.JmolScriptManager)
  - org.jmol.script.ScriptMathProcessor
  - org.jmol.script.ScriptProcess
  - org.jmol.script.ScriptProcessRunnable (implements java.lang.Runnable)
  - org.jmol.script.ScriptTokenParser
    - org.jmol.script.ScriptCompiler
  - org.jmol.viewer.SelectionManager
  - org.jmol.util.Shader
  - org.jmol.shape.Shape
    - org.jmol.shape.AtomShape
      - org.jmol.shape.Balls
      - org.jmol.shapebio.BioShape
      - org.jmol.shapespecial.Dots
        - org.jmol.shapespecial.GeoSurface
      - org.jmol.shapespecial.Ellipsoids
      - org.jmol.shape.Halos
      - org.jmol.shape.Labels
      - org.jmol.shape.Measures (implements org.jmol.api.JmolMeasurementClient)
      - org.jmol.shapespecial.Polyhedra (implements java.util.Comparator<T>)
      - org.jmol.shape.Stars
      - org.jmol.shapespecial.Vectors
    - org.jmol.shapebio.BioShapeCollection
      - org.jmol.shapebio.Backbone
      - org.jmol.shapebio.Ribbons
      - org.jmol.shapebio.Rockets
        - org.jmol.shapebio.Cartoon
      - org.jmol.shapebio.Strands
        - org.jmol.shapebio.MeshRibbon
      - org.jmol.shapebio.Trace
    - org.jmol.shapespecial.Dipoles
    - org.jmol.shape.FontLineShape
      - org.jmol.shape.Axes
      - org.jmol.shape.Bbcage
      - org.jmol.shape.Uccage
    - org.jmol.shape.Frank
    - org.jmol.shape.MeshCollection
      - org.jmol.shapecgo.CGO
      - org.jmol.shapespecial.Draw
      - org.jmol.shapesurface.Isosurface (implements org.jmol.jvxl.api.MeshDataServer)
        - org.jmol.shapesurface.Contact
        - org.jmol.shapesurface.LcaoCartoon
        - org.jmol.shapesurface.MolecularOrbital
          - org.jmol.shapesurface.NBO
        - org.jmol.shapesurface.Pmesh
          - org.jmol.shapesurface.Plot3D
    - org.jmol.shape.Sticks
    - org.jmol.shape.TextShape
      - org.jmol.shape.Echo
      - org.jmol.shape.Hover
  - org.jmol.viewer.ShapeManager
  - org.jmol.render.ShapeRenderer
    - org.jmol.render.BallsRenderer
    - org.jmol.renderbio.BioShapeRenderer
      - org.jmol.renderbio.BackboneRenderer
      - org.jmol.renderbio.StrandsRenderer
        - org.jmol.renderbio.MeshRibbonRenderer
          - org.jmol.renderbio.RibbonsRenderer
        - org.jmol.renderbio.RocketsRenderer
          - org.jmol.renderbio.CartoonRenderer
        - org.jmol.renderbio.TraceRenderer
    - org.jmol.renderspecial.DipolesRenderer
    - org.jmol.renderspecial.DotsRenderer
      - org.jmol.renderspecial.GeoSurfaceRenderer
    - org.jmol.renderspecial.EllipsoidsRenderer
    - org.jmol.render.FontLineShapeRenderer
      - org.jmol.render.CageRenderer
        - org.jmol.render.AxesRenderer
        - org.jmol.render.BbcageRenderer
        - org.jmol.render.UccageRenderer
      - org.jmol.render.LabelsRenderer
        - org.jmol.render.EchoRenderer
        - org.jmol.render.MeasuresRenderer
      - org.jmol.render.SticksRenderer
    - org.jmol.render.FrankRenderer
    - org.jmol.render.HalosRenderer
    - org.jmol.render.HoverRenderer
    - org.jmol.render.MeshRenderer
      - org.jmol.renderbio.BioMeshRenderer
      - org.jmol.renderspecial.DrawRenderer
        - org.jmol.rendercgo.CGORenderer
      - org.jmol.rendersurface.IsosurfaceRenderer
        - org.jmol.rendersurface.ContactRenderer
        - org.jmol.rendersurface.LcaoCartoonRenderer
        - org.jmol.rendersurface.MolecularOrbitalRenderer
          - org.jmol.rendersurface.NBORenderer
        - org.jmol.rendersurface.PmeshRenderer
          - org.jmol.rendersurface.Plot3DRenderer
    - org.jmol.renderspecial.PolyhedraRenderer
    - org.jmol.render.StarsRenderer
    - org.jmol.renderspecial.VectorsRenderer
  - org.openscience.jvxl.simplewriter.SimpleMarchingCubesOld
  - org.jmol.util.SimpleUnitCell
    - org.jmol.symmetry.UnitCell (implements java.lang.Cloneable)
  - org.jmol.multitouch.sparshui.SinglePointGesture (implements com.sparshui.gestures.Gesture)
  - org.jmol.quantum.SlaterData
  - org.jmol.adapter.readers.quantum.SlaterReader.OrbitalSorter (implements java.util.Comparator<T>)
  - org.jmol.adapter.readers.quantum.SlaterReader.SlaterSorter (implements java.util.Comparator<T>)
  - org.openscience.jmol.app.surfacetool.Slice
  - org.jmol.smiles.SmilesAromatic
  - org.jmol.scriptext.SmilesExt
  - org.jmol.smiles.SmilesGenerator
  - org.jmol.smiles.SmilesMatcher (implements org.jmol.api.SmilesMatcherInterface)
  - org.jmol.smiles.SmilesMeasure
  - org.jmol.smiles.SmilesParser
  - org.jmol.smiles.SmilesStereo
  - org.jmol.symmetry.SpaceGroup
  - org.jmol.adapter.readers.spartan.SpartanArchive
  - org.jmol.adapter.readers.spartan.SpartanUtil
  - org.jmol.g3d.SphereRenderer
  - org.jmol.viewer.StateManager
  - org.jmol.modelset.StateScript
  - org.openscience.jmol.app.jmolpanel.StatusListener (implements org.jmol.api.JmolStatusListener, org.jmol.api.JmolSyncInterface, org.jmol.api.JSVInterface)
  - org.jmol.viewer.StatusManager
  - org.jmol.adapter.smarter.Structure
  - org.jmol.adapter.readers.cif.Subsystem
  - org.jmol.jvxl.readers.SurfaceGenerator
  - org.jmol.jvxl.readers.SurfaceReader (implements org.jmol.jvxl.api.VertexDataServer)
    - org.jmol.jvxl.readers.SurfaceFileReader
      - org.jmol.jvxl.readers.PolygonFileReader
        - org.jmol.jvxl.readers.EfvetReader
        - org.jmol.jvxl.readers.NffReader
        - org.jmol.jvxl.readers.Pmesh4Reader
        - org.jmol.jvxl.readers.PmeshReader
          - org.jmol.jvxl.readers.KinemageReader
          - org.jmol.jvxl.readers.MsmsReader
          - org.jmol.jvxl.readers.ObjReader
        - org.jmol.jvxl.readers.Ras3DReader
      - org.jmol.jvxl.readers.VolumeFileReader
        - org.jmol.jvxl.readers.ApbsReader
        - org.jmol.jvxl.readers.CubeReader
        - org.jmol.jvxl.readers.DelPhiBinaryReader
        - org.jmol.jvxl.readers.IsoIntersectGridReader
        - org.jmol.jvxl.readers.JaguarReader
        - org.jmol.jvxl.readers.JvxlXmlReader
          - org.jmol.jvxl.readers.JvxlReader
        - org.jmol.jvxl.readers.MapFileReader
          - org.jmol.jvxl.readers.BCifDensityReader
            - org.jmol.jvxl.readers.CifDensityReader
          - org.jmol.jvxl.readers.Dsn6BinaryReader
          - org.jmol.jvxl.readers.MrcBinaryReader
          - org.jmol.jvxl.readers.PyMOLMeshReader
          - org.jmol.jvxl.readers.XplorReader
        - org.jmol.jvxl.readers.PeriodicVolumeFileReader
          - org.jmol.jvxl.readers.CastepDensityReader
          - org.jmol.jvxl.readers.VaspChgcarReader
        - org.jmol.jvxl.readers.PltFormattedReader
        - org.jmol.jvxl.readers.UhbdReader
        - org.jmol.jvxl.readers.XsfReader
    - org.jmol.jvxl.readers.VolumeDataReader
      - org.jmol.jvxl.readers.AtomDataReader
        - org.jmol.jvxl.readers.AtomPropertyMapper
        - org.jmol.jvxl.readers.IsoFxyReader
          - org.jmol.jvxl.readers.IsoFxyzReader
        - org.jmol.jvxl.readers.IsoIntersectAtomReader
        - org.jmol.jvxl.readers.IsoIntersectReader
        - org.jmol.jvxl.readers.IsoMepReader
          - org.jmol.jvxl.readers.IsoMlpReader
        - org.jmol.jvxl.readers.IsoMOReader
        - org.jmol.jvxl.readers.IsoPlaneReader
        - org.jmol.jvxl.readers.IsoSolventReader
      - org.jmol.jvxl.readers.IsoShapeReader
  - org.openscience.jmol.app.surfacetool.SurfaceStatus
  - org.openscience.jmol.app.surfacetool.SurfaceTool
  - org.jmol.script.SV.Sort (implements java.util.Comparator<T>)
  - org.jmol.awtjs.swing.SwingConstants
  - org.jmol.symmetry.Symmetry (implements org.jmol.api.SymmetryInterface)
  - org.jmol.symmetry.SymmetryDesc
  - org.jmol.symmetry.SymmetryInfo
  - org.jmol.script.T
    - org.jmol.script.ContextToken
    - org.jmol.script.SV (implements javajs.api.JSONEncodable)
  - javajs.util.T3 (implements javajs.api.JSONEncodable, java.io.Serializable)
    - org.jmol.util.MeshCapper.CapVertex (implements java.lang.Cloneable)
    - javajs.util.P3
      - org.jmol.adapter.smarter.Atom (implements java.lang.Cloneable)
      - org.jmol.jvxl.readers.IsoSolventReader.Edge
      - org.jmol.jvxl.calc.MarchingSquares.ContourVertex
      - org.jmol.util.Point3fi (implements java.lang.Cloneable)
        - org.jmol.modelset.Atom (implements org.jmol.util.Node)
      - org.jmol.quantum.QMAtom
      - org.jmol.smiles.SmilesAtom (implements org.jmol.util.Node)
    - javajs.util.V3
      - org.jmol.util.Vibration
        - org.jmol.util.ModulationSet (implements org.jmol.api.JmolModulationSet)
  - javajs.util.T3i (implements java.io.Serializable)
    - javajs.util.P3i
      - org.jmol.g3d.TextString (implements java.util.Comparator<T>)
  - org.jmol.util.TempArray
  - org.jmol.util.Tensor
  - org.jmol.modelset.Text
  - org.jmol.g3d.TextRenderer
  - org.jmol.render.TextRenderer
  - java.lang.Thread (implements java.lang.Runnable)
    - org.openscience.jmol.app.jmolpanel.console.AppConsole.ExecuteCommandThread
    - org.jmol.applet.ClassPreloader
    - org.openscience.jmol.app.InputScannerThread
    - org.jmol.thread.JmolThread
      - org.jmol.thread.AnimationThread
      - org.jmol.script.CommandWatcherThread
      - org.jmol.script.FileLoadThread
      - org.jmol.thread.HoverWatcherThread
      - org.jmol.minimize.MinimizationThread
      - org.jmol.thread.MoveToThread
      - org.jmol.navigate.Navigator (implements org.jmol.api.JmolNavigatorInterface)
      - org.jmol.script.ScriptDelayThread
      - org.jmol.script.ScriptQueueThread
      - org.jmol.thread.SpinThread
      - org.jmol.thread.TimeoutThread
      - org.jmol.thread.VibrationThread
    - org.jmol.applet.TickerThread
    - org.jmol.applet.WrappedAppletLoader
  - java.lang.Throwable (implements java.io.Serializable)
    - java.lang.Exception
      - org.jmol.smiles.InvalidSmilesException
      - java.io.IOException
        - org.jmol.viewer.JmolAsyncException
      - org.jmol.script.ScriptException
        - org.jmol.script.ScriptInterruption
  - org.jmol.modelset.TickInfo
  - org.jmol.modelset.Trajectory
  - javax.swing.TransferHandler (implements java.io.Serializable)
    - org.openscience.jmol.app.webexport.ArrayListTransferHandler
  - org.jmol.viewer.TransformManager
    - org.jmol.viewer.TransformManager4D
  - org.jmol.util.TriangleData
    - org.jmol.jvxl.calc.MarchingCubes
      - org.openscience.jvxl.simplewriter.SimpleMarchingCubes
    - org.jmol.util.Triangulator
  - org.jmol.multitouch.sparshui.TwoPointGesture (implements com.sparshui.gestures.Gesture)
  - org.jmol.util.Txt
  - org.jmol.symmetry.UnitCellIterator (implements org.jmol.api.AtomIndexIterator)
  - org.jmol.minimize.Util
  - org.jmol.adapter.readers.molxyz.V3000Rdr
  - org.jmol.jvxl.data.VolumeData
  - org.openscience.jvxl.simplewriter.VoxelDataCreator
  - org.jmol.smiles.VTemp
  - org.openscience.jmol.app.webexport.Widgets
  - org.openscience.jmol.app.webexport.Widgets.Widget
    - org.openscience.jmol.app.webexport.Widgets.AnimationWidget
    - org.openscience.jmol.app.webexport.Widgets.BackgroundColorWidget
    - org.openscience.jmol.app.webexport.Widgets.ConsoleWidget
    - org.openscience.jmol.app.webexport.Widgets.DownLoadWidget
    - org.openscience.jmol.app.webexport.Widgets.SpinOnWidget
    - org.openscience.jmol.app.webexport.Widgets.StereoViewWidget
  - java.awt.event.WindowAdapter (implements java.awt.event.WindowFocusListener, java.awt.event.WindowListener, java.awt.event.WindowStateListener)
    - org.openscience.jmol.app.jmolpanel.JmolPanel.AppCloser
    - org.openscience.jmol.app.jmolpanel.MeasurementTable.MeasurementListWindowListener
    - org.openscience.jmol.app.jmolpanel.PovrayDialog.PovrayWindowListener
    - org.openscience.jmol.app.jmolpanel.Splash.WindowListener
  - org.jmol.jvxl.readers.XmlReader
  - org.jmol.adapter.readers.xml.XmlReader.NVPair
  - org.jmol.adapter.smarter.XtalSymmetry

## Interface Hierarchy

- org.jmol.atomdata.AtomDataServer
- org.jmol.api.AtomIndexIterator
- org.jmol.modelset.BondIterator
- org.jmol.awtjs.swing.ColumnSelectionModel
- org.jmol.quantum.mo.DataAdder
- org.jmol.awtjs.swing.Document
- org.openscience.jmol.app.jmolpanel.console.EnterListener
- org.jmol.api.EventManager
- org.jmol.api.FontManager
  - org.jmol.api.GenericPlatform
- org.jmol.g3d.G3DRenderer
- org.jmol.api.js.GenericConsoleTextArea
- org.jmol.api.GenericFileInterface
- org.jmol.api.GenericGraphics
- org.jmol.api.GenericImageDialog
- org.jmol.api.GenericMenuInterface
- org.jmol.api.GenericMouseInterface
- org.jmol.console.GenericTextArea
- org.jmol.awtjs.swing.HTMLElement
- org.jmol.awtjs.swing.HTMLWindowEvent
- javajs.api.js.J2SObjectInterface
  - org.jmol.api.js.JmolToJSmolInterface
- org.jmol.api.JmolAbstractButton
- org.jmol.api.JmolAdapterAtomIterator
- org.jmol.api.JmolAnnotationParser
- org.jmol.api.JmolAppAPI
- org.jmol.api.JmolAppConsoleInterface
- org.jmol.api.JmolAudioPlayer
- org.jmol.api.JmolCallbackListener
  - org.jmol.api.JmolStatusListener
- org.jmol.viewer.JmolChimeMessenger
- org.jmol.api.JmolDataManager
- org.jmol.api.JmolDialogInterface
- org.jmol.api.JmolDropEditor
  - org.jmol.api.JmolScriptEditorInterface
- org.jmol.api.JmolEnvCalc
- org.jmol.awt.JmolFrame
- org.jmol.api.JmolGestureServerInterface
- org.jmol.api.JmolGraphicsInterface
  - org.jmol.api.JmolRendererInterface
- org.jmol.api.JmolJDXMOLParser
- org.jmol.api.JmolJDXMOLReader
- org.jmol.api.JmolJSpecView
- org.jmol.api.JmolMeasurementClient
- org.jmol.api.JmolModulationSet
- org.jmol.api.JmolMovieCreatorInterface
- org.jmol.multitouch.JmolMultiTouchAdapter
- org.jmol.multitouch.JmolMultiTouchClient
- org.jmol.api.JmolNMRInterface
- org.jmol.api.JmolParallelProcessor
- org.jmol.api.JmolPatternMatcher
- org.jmol.api.JmolPdfCreatorInterface
- org.openscience.jmol.app.JmolPlugin
- org.jmol.api.JmolPropertyManager
- org.jmol.api.JmolRepaintManager
- org.jmol.api.JmolSceneGenerator
- org.jmol.api.JmolScriptEvaluator
- org.jmol.api.JmolScriptFunction
- org.jmol.api.JmolScriptManager
- org.jmol.api.JmolSelectionListener
- org.jmol.api.JmolSyncInterface
  - org.jmol.api.JmolAppletInterface
- org.jmol.api.JmolTouchSimulatorInterface
- org.jmol.api.JmolZipUtilities
- javajs.api.js.JSAppletObject
  - org.jmol.api.js.JSmolAppletObject
- org.jmol.api.js.JSConsole
- org.jmol.consolejs.JSConsole
- org.openscience.jmol.app.jsonkiosk.JsonNioClient
- org.openscience.jmol.app.jsonkiosk.JsonNioServer
- org.jmol.api.JSVInterface
- org.jmol.awtjs.swing.ListSelectionModel
- org.jmol.util.LoggerInterface
- org.jmol.adapter.smarter.MSInterface
- org.jmol.api.PlatformViewer
- org.jmol.popup.PopupHelper
- org.jmol.api.PymolAtomReader
- java.lang.Runnable
  - org.jmol.api.JmolDomReaderInterface
  - org.jmol.api.JmolFilesReaderInterface
  - org.jmol.api.JmolNavigatorInterface
- org.jmol.api.SC
- org.jmol.util.SimpleEdge
- org.jmol.util.SimpleNode
  - org.jmol.util.Node
- org.jmol.api.SmilesMatcherInterface
- org.openscience.jmol.app.SplashInterface
- org.jmol.modelset.Structure
- org.jmol.awtjs.swing.SwingController
- org.jmol.api.SymmetryInterface
- org.jmol.awtjs.swing.TableCellRenderer
- org.jmol.awtjs.swing.TableColumn
  - org.jmol.awtjs.swing.AbstractTableModel
- org.jmol.api.Translator
- org.jmol.jvxl.api.VertexDataServer
  - org.jmol.jvxl.api.MeshDataServer
- org.jmol.applet.WrappedApplet

## Enum Hierarchy

- java.lang.Object
  - java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    - org.jmol.atomdata.RadiusData.EnumType
    - org.jmol.c.VDW
    - org.jmol.c.STR
    - org.jmol.c.STER
    - org.jmol.c.PAL
    - org.jmol.c.HB
    - org.jmol.c.FIL
    - org.jmol.c.CBK
    - org.jmol.modelsetbio.AlphaPolymer.Code
    - org.jmol.shapespecial.Draw.EnumDrawType
    - org.jmol.util.Edge.EnumBondOrder
    - org.jmol.viewer.Viewer.ACCESS