PhosphorusPolymer
Date: 2019-10-22

org.jmol.modelsetbio

## Class PhosphorusPolymer

- java.lang.Object
- - org.jmol.modelsetbio.BioPolymer
  - - org.jmol.modelsetbio.PhosphorusPolymer

- All Implemented Interfaces:
    Structure
  Direct Known Subclasses:
    NucleicPolymer

      public class PhosphorusPolymer
      extends BioPolymer

- - ### Field Summary

    - ### Fields inherited from class org.jmol.modelsetbio.BioPolymer

      `bioPolymerIndexInModel, bsSelectedMonomers, controlPoints, cyclicFlag, hasStructure, hasWingPoints, haveParameters, invalidControl, leadAtomIndices, leadMidpoints, leadPoints, model, monomerCount, monomers, reversed, sheetSmoothing, twistedSheets, type, TYPE_AMINO, TYPE_CARBOHYDRATE, TYPE_NOBONDING, TYPE_NUCLEIC, wingVectors`

  - ### Constructor Summary

    Constructors
    Constructor and Description
    `PhosphorusPolymer(Monomer[] monomers)`

  - ### Method Summary

    - ### Methods inherited from class org.jmol.modelsetbio.BioPolymer

      `calcEtaThetaAngles, calcParameters, calcPhiPsiAngles, calcRasmolHydrogenBonds, calcSelectedMonomersCount, calculateRamachandranHelixAngle, clearStructures, findNearestAtomIndex, getControlPoint, getControlPoints, getIndex, getLeadAtomIndices, getLeadMidPoint, getLeadMidpoints, getLeadPoint, getLeadPoints, getPolymerPointsAndVectors, getPolymerSequenceAtoms, getProteinStructure, getRange, getRangeGroups, getSelectedMonomerCount, getSequence, getType, getWingPoint, getWingVectors, isCyclic, isMonomerSelected, isNucleic, recalculateLeadMidpointsAndWingVectors, resetHydrogenPoints, set, setAtomBits, setAtomBitsAndClear, setConformation`

    - ### Methods inherited from class java.lang.Object

      `clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait`

- - ### Constructor Detail

    - #### PhosphorusPolymer

          PhosphorusPolymer(Monomer[] monomers)